BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F06SP1|AL426560
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1663 0.0
>3x_Contig1712
Length = 23668
Score = 1663 bits (835), Expect = 0.0
Identities = 841/847 (99%)
Strand = Plus / Plus
Query: 1 atcaatagatagtctagatacaagtgcagtacagcagggagagctttgcatccgtaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7329 atcaatagatagtctagatacaagtgcagtacagcagggagagctttgcatccgtaatca 7388
Query: 61 gaaacttagcgttgtttgaaattcgattctgtgaaataagaataaaagcgcctggtaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7389 gaaacttagcgttgtttgaaattcgattctgtgaaataagaataaaagcgcctggtaaat 7448
Query: 121 acgtatgacaagaatttgtgcataataatctgaaagcggatggcattgtatttattgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7449 acgtatgacaagaatttgtgcataataatctgaaagcggatggcattgtatttattgata 7508
Query: 181 ccattgttccttgaaacatttaattgtctggctgcacacctttctgactgaaggcactaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7509 ccattgttccttgaaacatttaattgtctggctgcacacctttctgactgaaggcactaa 7568
Query: 241 tatgtttttctttttttgtacctcagcyagggggcgcgcttccataattcttgaacgaac 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7569 tatgtttttctttttttgtacctcagctagggggcgcgcttccataattcttgaacgaac 7628
Query: 301 ttttcactgttagagttgaaactggacacgaaatctaggttctatctgtacctatggaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7629 ttttcactgttagagttgaaactggacacgaaatctaggttctatctgtacctatggaca 7688
Query: 361 tgtactttgttattttccataacaaagagaactcgtacagctggaatccgaacaaataat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7689 tgtactttgttattttccataacaaagagaactcgtacagctggaatccgaacaaataat 7748
Query: 421 aaaamamaaccaagacaagcaacaagaaatgaaggcacgcatttacaccgcaaccttaac 480
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7749 aaaaaaaaaccaagacaagcaacaagaaatgaaggcacgcatttacaccgcaaccttaac 7808
Query: 481 aatccattacttgattagggatcccacaagamattggccagtaaaattgagacaatattt 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7809 aatccattacttgattagggatcccacaagaaattggccagtaaaattgagacaatattt 7868
Query: 541 ctgcmacaggcaaattaagccattaccgacaatgctgcggatttgctcagaaaacaatgg 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7869 ctgcaacaggcaaattaagccattaccgacaatgctgcggatttgctcagaaaacaatgg 7928
Query: 601 tcaatggattggacaatcgggtatggatagatttccacaattccggtcttagagcatagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7929 tcaatggattggacaatcgggtatggatagatttccacaattccggtcttagagcatagt 7988
Query: 661 aaaattgcacaaggtaatcacgaagtagtgaacaamaacagcgccacccagaaatgaccg 720
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7989 aaaattgcacaaggtaatcacgaagtagtgaacaaaaacagcgccacccagaaatgaccg 8048
Query: 721 cagctgtgtcataatgcacgagaaacgtgtgaacggaagtgttttttttaaaattggaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8049 cagctgtgtcataatgcacgagaaacgtgtgaacggaagtgttttttttaaaattggaag 8108
Query: 781 gttccacgtttctcgacaatctttcctccgtcagatcgcgggggaatcaatactgtgaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8109 gttccacgtttctcgacaatctttcctccgtcagatcgcgggggaatcaatactgtgaat 8168
Query: 841 gcaaagt 847
|||||||
Sbjct: 8169 gcaaagt 8175
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6246
Number of Sequences: 1807
Number of extensions: 6246
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)